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List of scientific articles 2020

List of  of scientific articles 2020
Primary articles published in peer-reviewed journals or books

1- Allal, F., Grio, R., Phocas, F., Brard-Fudulea, S., Morvezen, R., Bestin, A., Haffray, P., François, Y., Morin, T., Ponce, C., Vergnet, A., Cariou, S., Brunier, J., Bruant, J-S., Peyrou, B., Gagnaire, P-A., Vandeputte, M., 2020. Genotyping of 4 European sea bass families with the DlabCHIP SNPs genotyping array. SEANOE. https://doi.org/10.17882/75696

2 - Allal, F., Griot, R., Phocas, F., Brard-Fudulea, S., Morvezen, R., Bestin, A., Haffray, P., François, Y., Morin, T., Ponce, C., Vergnet, A., Cariou, S., Brunier, J., Bruant, J-S., Peyrou, B., Gagnaire, P-A., Vandeputte, M., 2020. Axiom DlabCHIP, a 57K SNPs genotyping array for European sea bass (Dicentrarchus labrax): array design and genetic map. SEANOE. https://doi.org/10.17882/75680

3 - D’Ambrosio, J., Morvezen, R., Brard-Fudulea, S., Bestin, A., Poncet, C., Haffray, P., Dupont-Nivet, M., Phocas, F., 2020. Genetic architecture and genomic selection of female reproduction traits in rainbow trout. BMC Genomics, 21:558,  https://doi.org/10.1186/s12864-020-06955-7

4 - Feron, R., Zahm, M., Cabau, C., Klopp, C., Roques, C., Bouchez, O., Eché, C., Valière, S., Donnadieu, C., Haffray, P., Bestin, A., Morvezen, R., Acloque, H., Euclide, P., Wen, M., Jouanno, E., Schartl, M., Postlethwait, J. H., Schraidt, C., Christie, M., Larson, W., Herpin, A., Guiguen, Y., 2020.  Characterization of a Y-specific duplication/insertion of the anti-Mullerian hormone type II receptor gene based on a chromosome-scale genome assembly of yellow perch, Perca flavescens. Molecular Ecology Resources. 20:531–543.

5 - Fraslin, C., Phocas, F., Bestin, A., Charles, M., Bernard, M., Krieg, F., Dechamp, N., Ciobotaru, C., Hozé, C., Petitprez, F., Milhes, M., Lluch, J., Bouchez, O., Poncet, C., Hocdé, P., Haffray, P., Guiguen, Y., Quillet, E., 2020. Genetic determinism of spontaneous masculinisation in XX female rainbow trout: new insights using medium throughput genotyping and whole-genome sequencing. Submitted to Scientific Reports.https://doi.org/10.1101/2020.04.28.057240.

6 - Griot, R., Phocas, F., Brard-Fudulea, S., Morvezen, R., Bestin, A., Haffray, P., François, Y., Morin, T., Poncet, C., Vergnet, A., Cariou, S., Brunier, J., Bruant, J-S., Peyrou, B., Vandeputte, M., 2020. Genome-wide association studies for resistance to viral nervous necrosis in three populations of European sea bass (Dicentrarchus labrax) using a 57K SNP chip. Aquaculture. https://doi.org/10.1016/j.aquaculture.2020.735930

7 - Kuhl, H., Guiguen, Y., Höhne ; K., Kreuz, E., Du, K., Klopp, K., Lopez-Roques, C., Yebra-Pimentel, E. S., Ciorpac, M., Gessner ; J., Holostenco, D., Kleiner, W., Kohlmann, K., Lamatsch, D. D., Prokopov, D., Bestin, A., Bonpunt, E., Deboeuf S., Haffray, P., Morvezen, R., Patrice, P., Suciu, R., Dirks, R., Wuertz, S., Kloas, W., Schartl, M., Stöc, M., 2020. A 180 My-old female-specific genome region in sturgeon reveals the oldest known vertebrate sex determining system with undifferentiated sex chromosome. Phil. Trans. R. Soc. B.

8 - Piégu, B., Arensburger, P., Beauclair, L., Chabault, M., Raynaud, E., Coustham, V., Brard, S., Guizard, S., Burlot, T., Le Bihan-Duval, E., Bigot, Y., 2020. Variations in genome size between wild and domesticated lineages of fowls belonging to the Gallus gallus species. Genomics 112, 1660–1673. https://doi.org/10.1016/j.ygeno.2019.10.004

9 - Prchal, M., Kocour, K., Vandeputte, M. Kause, A., Vergnet, A., Zhao, J., Gela, D., Kašpar, V., Genestout, L., Bestin, A., Haffray, P., Bugeon, J., 2020. Morphological predictors of slaughter yields using 3D digitizer and their use in a common carp breeding program. Aquaculture, 520:734993. DOI: 10.1016/j.aquaculture.2020.734993

10 - Smits, M., Enez, F., Ferraresso, S., Dalla Rovere, G., Vétois, E., Auvray, J-F., Genestout, L., Mahla, R., Arcangeli, G., Paillard, C., Haffray, P., Bargelloni, L., 2020. Potential for genetic improvement of resistance to Perkinsus olseni in the manilla clam Ruditaped Philippinarum, using DNA-parentage assignment and mass spawning. Front. Vet. Sci..  doi: 10.3389/fvets.2020.579840

11 - Vandeputte, M., Fraslin, C., Haffray, P., Bestin, A., Allal, F., Kocour, M., Prchal, M., Dupont-Nivet, M., 2020. How to genetically increase fillet yield in fish: relevant genetic parameters and methods for the estimation of genetic gain. Aquaculture, 519, 1-11, https://doi.org/10.1016/j.aquaculture.2019.734877

12 - Zhao, J., Prchal, M., Palaiokostas, C., Houston, R., Kause, A., Bugeon, J., Vandeputte, M., Vergnet, A., Bestin, A., Vesely, T., Pokorova, D., Piackova, V., Pojezdal, L., Genestout, L., Gela, D., Kroupova, H., Kocour, M., 2020. Genetic relationship between koi herpesvirus disease resistance and production traits inferred from sibling performance in Amur mirror carp. Aquaculture. 520: 734986.